Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM238LA0A1B0GVL6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM238LA0A1B0GVL6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM238LA0A1B0GVL6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TMEM238LA0A1B0GVL6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM238LA0A1B0GVL6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM238LA0A1B0GVL6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 EP400NL-214ENST00000641289 2402 ntBASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM238LA0A1B0GVL6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM238LA0A1B0GVL6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM238LA0A1B0GVL6 AC010864.1-201ENST00000609407 1511 ntBASIC16.78■□□□□ 0.28
TMEM238LA0A1B0GVL6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM238LA0A1B0GVL6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM238LA0A1B0GVL6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM238LA0A1B0GVL6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM238LA0A1B0GVL6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM238LA0A1B0GVL6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM238LA0A1B0GVL6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
TMEM238LA0A1B0GVL6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM238LA0A1B0GVL6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM238LA0A1B0GVL6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM238LA0A1B0GVL6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM238LA0A1B0GVL6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
TMEM238LA0A1B0GVL6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TMEM238LA0A1B0GVL6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM238LA0A1B0GVL6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM238LA0A1B0GVL6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM238LA0A1B0GVL6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM238LA0A1B0GVL6 AC015813.7-201ENST00000623294 581 ntBASIC16.76■□□□□ 0.27
TMEM238LA0A1B0GVL6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TMEM238LA0A1B0GVL6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM238LA0A1B0GVL6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM238LA0A1B0GVL6 AL139125.2-201ENST00000623134 1869 ntBASIC16.76■□□□□ 0.27
TMEM238LA0A1B0GVL6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM238LA0A1B0GVL6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM238LA0A1B0GVL6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM238LA0A1B0GVL6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM238LA0A1B0GVL6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM238LA0A1B0GVL6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM238LA0A1B0GVL6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM238LA0A1B0GVL6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM238LA0A1B0GVL6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TMEM238LA0A1B0GVL6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TMEM238LA0A1B0GVL6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMEM238LA0A1B0GVL6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 C9orf163-202ENST00000624034 2573 ntBASIC16.73■□□□□ 0.27
TMEM238LA0A1B0GVL6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM238LA0A1B0GVL6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM238LA0A1B0GVL6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM238LA0A1B0GVL6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM238LA0A1B0GVL6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM238LA0A1B0GVL6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM238LA0A1B0GVL6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM238LA0A1B0GVL6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM238LA0A1B0GVL6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms