Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 AC243591.1-201ENST00000452967 1364 ntBASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CLCA3PQ9Y6N3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 AC006504.4-201ENST00000592118 1568 ntBASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 UBALD1-205ENST00000590891 2641 ntBASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 AC093525.9-201ENST00000624961 1746 ntBASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 ELK2BP-201ENST00000415014 1224 ntBASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 AC120114.3-201ENST00000611923 658 ntBASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 BX640515.1-201ENST00000617215 977 ntBASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLCA3PQ9Y6N3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLCA3PQ9Y6N3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 AC073621.1-201ENST00000392730 636 ntBASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 IL9RP2-201ENST00000423948 1312 ntBASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms