Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 CROCCP1-201ENST00000426910 5675 ntBASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CYP46A1Q9Y6A2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 AF238378.1-201ENST00000526806 358 ntBASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CYP46A1Q9Y6A2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 CLEC4GP1-201ENST00000596555 870 ntBASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 AC012313.10-201ENST00000623509 926 ntBASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
CYP46A1Q9Y6A2 TNRC18P3-201ENST00000441896 2691 ntBASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 PAWRP1-201ENST00000451083 565 ntBASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 AC021087.4-201ENST00000563761 564 ntBASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 AC025062.2-201ENST00000605477 670 ntBASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.1■□□□□ 0.81
CYP46A1Q9Y6A2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CYP46A1Q9Y6A2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms