Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 AL021920.2-201ENST00000624828 1351 ntBASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB13Q9Y5F0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 TUBB8P12-201ENST00000308911 1335 ntBASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 TUBB7P-202ENST00000428444 1305 ntBASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 TUBB8P7-204ENST00000567960 1332 ntBASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 AL121894.2-201ENST00000602977 491 ntBASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 AC008667.4-201ENST00000607370 168 ntBASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 AC106886.4-201ENST00000623557 2502 ntBASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 AC005915.1-201ENST00000624912 2018 ntBASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB13Q9Y5F0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 HLA-A-201ENST00000376802 1334 ntBASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 NKILA-202ENST00000614771 2598 ntBASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 AC092910.1-201ENST00000482027 1129 ntBASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 IGHV3-65-201ENST00000523210 341 ntBASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 AL049840.3-201ENST00000602669 611 ntBASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB13Q9Y5F0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB13Q9Y5F0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB13Q9Y5F0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHB13Q9Y5F0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHB13Q9Y5F0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB13Q9Y5F0 AC011676.5-201ENST00000624864 2660 ntBASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms