Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 AC022494.1-201ENST00000466044 728 ntBASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 AC010336.2-201ENST00000564226 506 ntBASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 BCL2-203ENST00000589955 5011 ntBASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RTCBQ9Y3I0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 DGCR5-201ENST00000399539 862 ntBASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 INE1-201ENST00000456273 945 ntBASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 AC135586.1-201ENST00000539323 574 ntBASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 SPTSSB-204ENST00000617024 1292 ntBASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 IGHV3-72-202ENST00000621503 303 ntBASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 AC093525.9-201ENST00000624961 1746 ntBASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.17■□□□□ 0.98
RTCBQ9Y3I0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 GNAQP1-201ENST00000444815 1067 ntBASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.16■□□□□ 0.98
RTCBQ9Y3I0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 DFFBP1-201ENST00000433250 979 ntBASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 AC105021.1-202ENST00000570572 669 ntBASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 MIR6799-201ENST00000620297 69 ntBASIC21.15■□□□□ 0.98
RTCBQ9Y3I0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms