Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC010507.1-201ENST00000633895 436 ntBASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 AC009053.2-201ENST00000563701 2365 ntBASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHA4Q9UN74 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 AGGF1P2-201ENST00000426656 2106 ntBASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 KRT18P2-201ENST00000447938 1258 ntBASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 AC096734.2-201ENST00000562054 433 ntBASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDHA4Q9UN74 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHA4Q9UN74 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHA4Q9UN74 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHA4Q9UN74 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHA4Q9UN74 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHA4Q9UN74 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHA4Q9UN74 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.33■□□□□ 0.69
PCDHA4Q9UN74 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PCDHA4Q9UN74 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PCDHA4Q9UN74 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 RHOQP3-201ENST00000437982 621 ntBASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 AC140113.2-201ENST00000604370 208 ntBASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHA4Q9UN74 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 AC011676.5-201ENST00000624864 2660 ntBASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 AC027601.4-201ENST00000611259 610 ntBASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms