Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 AL732292.2-201ENST00000609649 430 ntBASIC15.3■□□□□ 0.04
ZNF346Q9UL40 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF346Q9UL40 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 TPM4P1-201ENST00000436100 807 ntBASIC15.29■□□□□ 0.04
ZNF346Q9UL40 AC106795.1-205ENST00000512851 1056 ntBASIC15.29■□□□□ 0.04
ZNF346Q9UL40 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 NKAPP1-205ENST00000585790 367 ntBASIC15.29■□□□□ 0.04
ZNF346Q9UL40 AC064862.7-201ENST00000604520 867 ntBASIC15.29■□□□□ 0.04
ZNF346Q9UL40 AC012313.10-201ENST00000623509 926 ntBASIC15.29■□□□□ 0.04
ZNF346Q9UL40 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF346Q9UL40 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 TUBB8P12-201ENST00000308911 1335 ntBASIC15.28■□□□□ 0.04
ZNF346Q9UL40 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 TUBB7P-202ENST00000428444 1305 ntBASIC15.28■□□□□ 0.04
ZNF346Q9UL40 TUBB8P7-204ENST00000567960 1332 ntBASIC15.28■□□□□ 0.04
ZNF346Q9UL40 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 TSPY19P-201ENST00000418461 509 ntBASIC15.28■□□□□ 0.04
ZNF346Q9UL40 TSPY18P-201ENST00000441642 509 ntBASIC15.28■□□□□ 0.04
ZNF346Q9UL40 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 AL353135.1-201ENST00000606729 504 ntBASIC15.28■□□□□ 0.04
ZNF346Q9UL40 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF346Q9UL40 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms