Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
STAG3Q9UJ98 SLC9A3P2-201ENST00000447821 2021 ntBASIC24.17■■□□□ 1.46
STAG3Q9UJ98 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
STAG3Q9UJ98 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 AL035456.1-201ENST00000456064 1369 ntBASIC24.16■■□□□ 1.46
STAG3Q9UJ98 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 EGFEM1P-202ENST00000431685 1563 ntBASIC24.16■■□□□ 1.46
STAG3Q9UJ98 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 FOS-208ENST00000555686 1496 ntTSL 2 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 AL353705.2-201ENST00000428243 662 ntBASIC24.16■■□□□ 1.46
STAG3Q9UJ98 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 MTND6P24-201ENST00000440466 518 ntBASIC24.16■■□□□ 1.46
STAG3Q9UJ98 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 AC009407.1-201ENST00000568958 598 ntBASIC24.16■■□□□ 1.46
STAG3Q9UJ98 AC140912.1-201ENST00000577171 1054 ntBASIC24.16■■□□□ 1.46
STAG3Q9UJ98 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 IFT20-216ENST00000588477 774 ntTSL 5 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG3Q9UJ98 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 AC104581.1-202ENST00000635932 2618 ntBASIC24.15■■□□□ 1.46
STAG3Q9UJ98 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 HLA-H-201ENST00000383620 1096 ntBASIC24.15■■□□□ 1.46
STAG3Q9UJ98 AL353779.1-201ENST00000434793 351 ntBASIC24.15■■□□□ 1.46
STAG3Q9UJ98 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 HILS1-202ENST00000545329 423 ntBASIC24.15■■□□□ 1.46
STAG3Q9UJ98 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 TEX28P1-201ENST00000613479 1221 ntBASIC24.15■■□□□ 1.46
STAG3Q9UJ98 TEX28P2-201ENST00000617764 1221 ntBASIC24.15■■□□□ 1.46
STAG3Q9UJ98 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 AC098818.2-201ENST00000564925 2320 ntBASIC24.15■■□□□ 1.46
STAG3Q9UJ98 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
STAG3Q9UJ98 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC24.14■■□□□ 1.46
STAG3Q9UJ98 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
STAG3Q9UJ98 NME9-203ENST00000383180 2133 ntTSL 2 BASIC24.14■■□□□ 1.46
STAG3Q9UJ98 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
STAG3Q9UJ98 LINC00896-202ENST00000609602 2128 ntBASIC24.14■■□□□ 1.46
STAG3Q9UJ98 AC012317.2-201ENST00000623305 2251 ntBASIC24.14■■□□□ 1.46
STAG3Q9UJ98 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC24.14■■□□□ 1.46
STAG3Q9UJ98 AC087499.5-201ENST00000452760 1342 ntBASIC24.14■■□□□ 1.46
STAG3Q9UJ98 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
STAG3Q9UJ98 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC24.14■■□□□ 1.46
STAG3Q9UJ98 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC24.14■■□□□ 1.46
STAG3Q9UJ98 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 API5-211ENST00000534695 560 ntTSL 5 BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 CYP2A7P1-201ENST00000595391 815 ntBASIC24.14■■□□□ 1.45
STAG3Q9UJ98 AL589739.1-201ENST00000607720 493 ntBASIC24.14■■□□□ 1.45
STAG3Q9UJ98 CETN4P-206ENST00000642099 2168 ntBASIC24.14■■□□□ 1.45
STAG3Q9UJ98 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
STAG3Q9UJ98 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms