Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 AC093512.1-201ENST00000617969 520 ntBASIC19.06■□□□□ 0.64
COL20A1Q9P218 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 AC084121.4-201ENST00000641598 221 ntBASIC19.06■□□□□ 0.64
COL20A1Q9P218 AF228730.8-201ENST00000642140 221 ntBASIC19.06■□□□□ 0.64
COL20A1Q9P218 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL20A1Q9P218 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL20A1Q9P218 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 TUBB8P12-201ENST00000308911 1335 ntBASIC19.05■□□□□ 0.64
COL20A1Q9P218 TUBB7P-202ENST00000428444 1305 ntBASIC19.05■□□□□ 0.64
COL20A1Q9P218 TUBB8P7-204ENST00000567960 1332 ntBASIC19.05■□□□□ 0.64
COL20A1Q9P218 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 AC006277.1-201ENST00000624348 1610 ntBASIC19.05■□□□□ 0.64
COL20A1Q9P218 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 Z92544.3-201ENST00000624747 417 ntBASIC19.05■□□□□ 0.64
COL20A1Q9P218 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL20A1Q9P218 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.05■□□□□ 0.64
COL20A1Q9P218 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL20A1Q9P218 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.04■□□□□ 0.64
COL20A1Q9P218 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.03■□□□□ 0.64
COL20A1Q9P218 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
COL20A1Q9P218 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.03■□□□□ 0.64
COL20A1Q9P218 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.03■□□□□ 0.64
COL20A1Q9P218 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.03■□□□□ 0.64
COL20A1Q9P218 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
COL20A1Q9P218 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL20A1Q9P218 SLC25A39P2-201ENST00000537614 270 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms