Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 AC106820.2-201ENST00000563775 3264 ntBASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 AC092053.1-201ENST00000605787 1936 ntBASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20BQ9P0W2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 AD000864.1-201ENST00000624076 2295 ntBASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 MIR4515-201ENST00000584082 81 ntBASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20BQ9P0W2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 HMGA1P7-201ENST00000406908 502 ntBASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 CEND1P1-201ENST00000451006 455 ntBASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 AL645728.2-201ENST00000641974 660 ntBASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 TOP3BP1-201ENST00000420768 1380 ntBASIC20.59■□□□□ 0.89
HMG20BQ9P0W2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 SLC22A20-204ENST00000530038 1673 ntBASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 AC005412.3-201ENST00000580309 715 ntBASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.58■□□□□ 0.89
HMG20BQ9P0W2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20BQ9P0W2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20BQ9P0W2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.58■□□□□ 0.88
HMG20BQ9P0W2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HMG20BQ9P0W2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.58■□□□□ 0.88
HMG20BQ9P0W2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20BQ9P0W2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20BQ9P0W2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20BQ9P0W2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMG20BQ9P0W2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms