Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TREX1Q9NSU2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 IGHV3-65-201ENST00000523210 341 ntBASIC16.88■□□□□ 0.29
TREX1Q9NSU2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 AC091167.2-201ENST00000579581 588 ntBASIC16.88■□□□□ 0.29
TREX1Q9NSU2 RN7SL510P-201ENST00000581311 263 ntBASIC16.88■□□□□ 0.29
TREX1Q9NSU2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 GGTLC5P-201ENST00000617623 998 ntBASIC16.88■□□□□ 0.29
TREX1Q9NSU2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 SLC22A20-204ENST00000530038 1673 ntBASIC16.88■□□□□ 0.29
TREX1Q9NSU2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.88■□□□□ 0.29
TREX1Q9NSU2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 AC006449.5-201ENST00000610658 2098 ntBASIC16.87■□□□□ 0.29
TREX1Q9NSU2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 AF186996.4-201ENST00000467186 377 ntBASIC16.87■□□□□ 0.29
TREX1Q9NSU2 AC105339.3-201ENST00000560043 636 ntBASIC16.87■□□□□ 0.29
TREX1Q9NSU2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 AL356488.2-201ENST00000602755 427 ntBASIC16.87■□□□□ 0.29
TREX1Q9NSU2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 TNRC18P3-201ENST00000441896 2691 ntBASIC16.87■□□□□ 0.29
TREX1Q9NSU2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TREX1Q9NSU2 AP002414.3-201ENST00000589352 1468 ntBASIC16.86■□□□□ 0.29
TREX1Q9NSU2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 ALOX12P2-203ENST00000570921 1945 ntBASIC16.86■□□□□ 0.29
TREX1Q9NSU2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 PMS2P1-201ENST00000431037 1228 ntBASIC16.86■□□□□ 0.29
TREX1Q9NSU2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 AC104692.2-201ENST00000603054 253 ntBASIC16.86■□□□□ 0.29
TREX1Q9NSU2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms