Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
UBE2OQ9C0C9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 IGHV3-72-202ENST00000621503 303 ntBASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 ABALON-201ENST00000629058 1903 ntBASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 AC007541.1-201ENST00000570282 1469 ntBASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UBE2OQ9C0C9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 INE1-201ENST00000456273 945 ntBASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 AC140912.1-201ENST00000577171 1054 ntBASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 MIR4515-201ENST00000584082 81 ntBASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE2OQ9C0C9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 AC011270.2-201ENST00000624293 2550 ntBASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 TNRC18P3-201ENST00000441896 2691 ntBASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms