Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AL512361.1-201ENST00000554200 418 ntBASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.1■□□□□ 0.97
CNTNAP4Q9C0A0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 AL512384.1-201ENST00000406683 331 ntBASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 AC093004.1-201ENST00000508850 424 ntBASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP4Q9C0A0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 AC087499.6-201ENST00000411576 835 ntBASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 RN7SL618P-201ENST00000477850 296 ntBASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 AL162274.1-201ENST00000617191 1098 ntBASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP4Q9C0A0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 AL138688.1-201ENST00000624851 1594 ntBASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP4Q9C0A0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 AC013467.2-201ENST00000605472 835 ntBASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP4Q9C0A0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CNTNAP4Q9C0A0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP4Q9C0A0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.06■□□□□ 0.96
CNTNAP4Q9C0A0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.06■□□□□ 0.96
CNTNAP4Q9C0A0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.06■□□□□ 0.96
CNTNAP4Q9C0A0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CNTNAP4Q9C0A0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.06■□□□□ 0.96
CNTNAP4Q9C0A0 ACA64.2-201ENST00000459014 129 ntBASIC21.06■□□□□ 0.96
CNTNAP4Q9C0A0 AC022494.1-201ENST00000466044 728 ntBASIC21.06■□□□□ 0.96
CNTNAP4Q9C0A0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms