Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCGF1Q9BSM1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 AL023806.1-201ENST00000603994 1649 ntBASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 PRYP5-201ENST00000451909 266 ntBASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 AL596257.1-201ENST00000641463 2694 ntBASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 AC104109.2-201ENST00000602919 1418 ntBASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCGF1Q9BSM1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 AL589182.2-201ENST00000619332 1049 ntBASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 AC005593.1-201ENST00000624894 515 ntBASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 NCF1C-201ENST00000438382 1427 ntBASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 AC009336.1-201ENST00000608941 1553 ntBASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 AC097637.2-201ENST00000624096 1997 ntBASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms