Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN18Q99952 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN18Q99952 AL512343.1-201ENST00000605837 169 ntBASIC19.21■□□□□ 0.67
PTPN18Q99952 AC007431.3-201ENST00000623221 587 ntBASIC19.21■□□□□ 0.67
PTPN18Q99952 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN18Q99952 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.21■□□□□ 0.67
PTPN18Q99952 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN18Q99952 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN18Q99952 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN18Q99952 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN18Q99952 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN18Q99952 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN18Q99952 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTPN18Q99952 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN18Q99952 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.2■□□□□ 0.66
PTPN18Q99952 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN18Q99952 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTPN18Q99952 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
PTPN18Q99952 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN18Q99952 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN18Q99952 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN18Q99952 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN18Q99952 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
PTPN18Q99952 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN18Q99952 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PTPN18Q99952 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PTPN18Q99952 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN18Q99952 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN18Q99952 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN18Q99952 SLC7A15P-201ENST00000424028 1363 ntBASIC19.19■□□□□ 0.66
PTPN18Q99952 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN18Q99952 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN18Q99952 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN18Q99952 AC098818.2-201ENST00000564925 2320 ntBASIC19.19■□□□□ 0.66
PTPN18Q99952 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTPN18Q99952 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN18Q99952 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN18Q99952 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN18Q99952 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPN18Q99952 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PTPN18Q99952 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPN18Q99952 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN18Q99952 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN18Q99952 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN18Q99952 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN18Q99952 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN18Q99952 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
PTPN18Q99952 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN18Q99952 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN18Q99952 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN18Q99952 AC009113.1-201ENST00000570267 2443 ntBASIC19.19■□□□□ 0.66
PTPN18Q99952 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN18Q99952 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN18Q99952 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTPN18Q99952 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PTPN18Q99952 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 AC098859.1-201ENST00000502915 1238 ntBASIC19.18■□□□□ 0.66
PTPN18Q99952 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPN18Q99952 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN18Q99952 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN18Q99952 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN18Q99952 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN18Q99952 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTPN18Q99952 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN18Q99952 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
PTPN18Q99952 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN18Q99952 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms