Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AP000974.1-201ENST00000623909 2387 ntBASIC22.18■■□□□ 1.14
ABCA3Q99758 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCA3Q99758 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCA3Q99758 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCA3Q99758 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCA3Q99758 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
ABCA3Q99758 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCA3Q99758 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
ABCA3Q99758 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
ABCA3Q99758 AC104989.1-201ENST00000519711 778 ntBASIC22.17■■□□□ 1.14
ABCA3Q99758 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
ABCA3Q99758 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC22.17■■□□□ 1.14
ABCA3Q99758 AC015936.2-201ENST00000593177 259 ntBASIC22.17■■□□□ 1.14
ABCA3Q99758 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCA3Q99758 TECR-220ENST00000600083 1204 ntTSL 2 BASIC22.17■■□□□ 1.14
ABCA3Q99758 TEX48-202ENST00000612244 662 ntTSL 3 BASIC22.17■■□□□ 1.14
ABCA3Q99758 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.17■■□□□ 1.14
ABCA3Q99758 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.17■■□□□ 1.14
ABCA3Q99758 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC22.17■■□□□ 1.14
ABCA3Q99758 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCA3Q99758 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.17■■□□□ 1.14
ABCA3Q99758 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCA3Q99758 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC22.17■■□□□ 1.14
ABCA3Q99758 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
ABCA3Q99758 AC093724.1-201ENST00000448659 1027 ntBASIC22.17■■□□□ 1.14
ABCA3Q99758 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCA3Q99758 AC018665.1-201ENST00000622927 1362 ntBASIC22.17■■□□□ 1.14
ABCA3Q99758 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCA3Q99758 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC22.16■■□□□ 1.14
ABCA3Q99758 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCA3Q99758 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCA3Q99758 FAM8A2P-201ENST00000528813 1142 ntBASIC22.16■■□□□ 1.14
ABCA3Q99758 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC22.16■■□□□ 1.14
ABCA3Q99758 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCA3Q99758 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCA3Q99758 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCA3Q99758 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.16■■□□□ 1.14
ABCA3Q99758 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCA3Q99758 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC22.16■■□□□ 1.14
ABCA3Q99758 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
ABCA3Q99758 SNX33P1-201ENST00000592116 1762 ntBASIC22.16■■□□□ 1.14
ABCA3Q99758 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
ABCA3Q99758 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 AC012317.2-201ENST00000623305 2251 ntBASIC22.15■■□□□ 1.14
ABCA3Q99758 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC22.15■■□□□ 1.14
ABCA3Q99758 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC22.15■■□□□ 1.14
ABCA3Q99758 RPS15-212ENST00000593052 629 ntTSL 2 BASIC22.15■■□□□ 1.14
ABCA3Q99758 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 KRT8P44-201ENST00000441609 1350 ntBASIC22.15■■□□□ 1.14
ABCA3Q99758 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.15■■□□□ 1.14
ABCA3Q99758 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.15■■□□□ 1.14
ABCA3Q99758 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCA3Q99758 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.15■■□□□ 1.14
ABCA3Q99758 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ABCA3Q99758 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ABCA3Q99758 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC22.14■■□□□ 1.14
ABCA3Q99758 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.14
ABCA3Q99758 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC22.14■■□□□ 1.14
ABCA3Q99758 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
ABCA3Q99758 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC22.14■■□□□ 1.14
ABCA3Q99758 RPS24-214ENST00000613865 538 ntTSL 5 BASIC22.14■■□□□ 1.14
ABCA3Q99758 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC22.14■■□□□ 1.14
ABCA3Q99758 AL033527.5-202ENST00000641632 1098 ntBASIC22.14■■□□□ 1.14
ABCA3Q99758 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
ABCA3Q99758 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCA3Q99758 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
ABCA3Q99758 CLK3P2-201ENST00000427566 1453 ntBASIC22.14■■□□□ 1.13
ABCA3Q99758 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC22.14■■□□□ 1.13
ABCA3Q99758 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ABCA3Q99758 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCA3Q99758 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ABCA3Q99758 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC22.14■■□□□ 1.13
ABCA3Q99758 RAD18-204ENST00000418463 563 ntTSL 4 BASIC22.14■■□□□ 1.13
ABCA3Q99758 RAD18-205ENST00000421052 582 ntTSL 3 BASIC22.14■■□□□ 1.13
ABCA3Q99758 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC22.14■■□□□ 1.13
ABCA3Q99758 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC22.14■■□□□ 1.13
ABCA3Q99758 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ABCA3Q99758 AC098859.1-201ENST00000502915 1238 ntBASIC22.14■■□□□ 1.13
ABCA3Q99758 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC22.14■■□□□ 1.13
ABCA3Q99758 NEU3-203ENST00000529024 581 ntTSL 3 BASIC22.14■■□□□ 1.13
ABCA3Q99758 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCA3Q99758 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
ABCA3Q99758 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
ABCA3Q99758 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCA3Q99758 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCA3Q99758 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCA3Q99758 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCA3Q99758 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCA3Q99758 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCA3Q99758 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC22.13■■□□□ 1.13
ABCA3Q99758 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms