Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.47■□□□□ 0.39
CDCA3Q99618 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.47■□□□□ 0.39
CDCA3Q99618 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDCA3Q99618 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDCA3Q99618 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CDCA3Q99618 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCA3Q99618 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDCA3Q99618 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDCA3Q99618 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.47■□□□□ 0.39
CDCA3Q99618 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDCA3Q99618 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.47■□□□□ 0.39
CDCA3Q99618 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.47■□□□□ 0.39
CDCA3Q99618 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDCA3Q99618 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
CDCA3Q99618 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 AC073439.1-201ENST00000624121 1774 ntBASIC17.46■□□□□ 0.39
CDCA3Q99618 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDCA3Q99618 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCA3Q99618 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.46■□□□□ 0.39
CDCA3Q99618 AL512384.1-201ENST00000406683 331 ntBASIC17.46■□□□□ 0.39
CDCA3Q99618 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
CDCA3Q99618 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDCA3Q99618 INE1-201ENST00000456273 945 ntBASIC17.46■□□□□ 0.39
CDCA3Q99618 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCA3Q99618 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCA3Q99618 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.46■□□□□ 0.39
CDCA3Q99618 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.46■□□□□ 0.39
CDCA3Q99618 HILS1-202ENST00000545329 423 ntBASIC17.46■□□□□ 0.39
CDCA3Q99618 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCA3Q99618 AC106886.1-201ENST00000568660 600 ntBASIC17.46■□□□□ 0.39
CDCA3Q99618 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCA3Q99618 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.46■□□□□ 0.39
CDCA3Q99618 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.46■□□□□ 0.39
CDCA3Q99618 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCA3Q99618 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCA3Q99618 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDCA3Q99618 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA3Q99618 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDCA3Q99618 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDCA3Q99618 FRMD8P1-201ENST00000440433 1524 ntBASIC17.46■□□□□ 0.39
CDCA3Q99618 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCA3Q99618 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDCA3Q99618 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CDCA3Q99618 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDCA3Q99618 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDCA3Q99618 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDCA3Q99618 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.45■□□□□ 0.38
CDCA3Q99618 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCA3Q99618 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDCA3Q99618 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDCA3Q99618 DGCR5-201ENST00000399539 862 ntBASIC17.45■□□□□ 0.38
CDCA3Q99618 AL080243.2-201ENST00000418783 582 ntBASIC17.45■□□□□ 0.38
CDCA3Q99618 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.45■□□□□ 0.38
CDCA3Q99618 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.45■□□□□ 0.38
CDCA3Q99618 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.45■□□□□ 0.38
CDCA3Q99618 AL133215.2-201ENST00000609242 977 ntBASIC17.45■□□□□ 0.38
CDCA3Q99618 MIR6799-201ENST00000620297 69 ntBASIC17.45■□□□□ 0.38
CDCA3Q99618 IGHV3-72-202ENST00000621503 303 ntBASIC17.45■□□□□ 0.38
CDCA3Q99618 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCA3Q99618 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.45■□□□□ 0.38
CDCA3Q99618 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDCA3Q99618 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCA3Q99618 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDCA3Q99618 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA3Q99618 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA3Q99618 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA3Q99618 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms