Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 AL139011.1-202ENST00000642063 584 ntBASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK5RAP2Q96SN8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 AL080243.2-201ENST00000418783 582 ntBASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 MPDU1-223ENST00000582151 728 ntBASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 MIR4453-201ENST00000584019 89 ntBASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 AC100757.3-201ENST00000622361 1406 ntBASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.72■□□□□ 0.75
CDK5RAP2Q96SN8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 AC007967.4-201ENST00000614700 386 ntBASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 FO538757.1-201ENST00000623083 1397 ntBASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 RNF165-205ENST00000588679 2904 ntBASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 AC093724.1-201ENST00000448659 1027 ntBASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP2Q96SN8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 HLA-A-202ENST00000376806 1854 ntBASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 MIR346-201ENST00000362234 95 ntBASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 LINC02084-201ENST00000606069 1096 ntBASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 AC004840.1-201ENST00000636359 365 ntBASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP2Q96SN8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.69■□□□□ 0.74
CDK5RAP2Q96SN8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms