Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 AC100803.2-201ENST00000562459 1963 ntBASIC14.38□□□□□ -0.11
CLCC1Q96S66 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 HBZP1-201ENST00000354915 429 ntBASIC14.38□□□□□ -0.11
CLCC1Q96S66 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 HLA-F-220ENST00000434407 884 ntBASIC14.38□□□□□ -0.11
CLCC1Q96S66 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 AC063952.2-201ENST00000498792 1227 ntBASIC14.38□□□□□ -0.11
CLCC1Q96S66 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 VENTXP5-201ENST00000523979 775 ntBASIC14.38□□□□□ -0.11
CLCC1Q96S66 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 LINC01238-205ENST00000567549 1107 ntBASIC14.38□□□□□ -0.11
CLCC1Q96S66 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CLCC1Q96S66 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCC1Q96S66 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 AC007950.2-201ENST00000615045 2347 ntBASIC14.37□□□□□ -0.11
CLCC1Q96S66 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 AL049597.2-201ENST00000565575 961 ntBASIC14.37□□□□□ -0.11
CLCC1Q96S66 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 LINC00167-201ENST00000530583 1419 ntBASIC14.37□□□□□ -0.11
CLCC1Q96S66 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLCC1Q96S66 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCC1Q96S66 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms