Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM47Q96LD4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 AL513480.1-201ENST00000451731 511 ntBASIC19.84■□□□□ 0.77
TRIM47Q96LD4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 TERF1P3-201ENST00000505638 1227 ntBASIC19.84■□□□□ 0.77
TRIM47Q96LD4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 KRT8P48-201ENST00000515599 1220 ntBASIC19.84■□□□□ 0.77
TRIM47Q96LD4 AC051619.7-201ENST00000568314 623 ntBASIC19.84■□□□□ 0.77
TRIM47Q96LD4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 AC026120.1-201ENST00000611536 926 ntBASIC19.84■□□□□ 0.77
TRIM47Q96LD4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 AL355312.1-201ENST00000407115 2176 ntBASIC19.84■□□□□ 0.77
TRIM47Q96LD4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRIM47Q96LD4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 AL355306.1-201ENST00000415580 579 ntBASIC19.83■□□□□ 0.77
TRIM47Q96LD4 AC005237.2-201ENST00000434368 219 ntBASIC19.83■□□□□ 0.77
TRIM47Q96LD4 CNN2P2-201ENST00000443536 909 ntBASIC19.83■□□□□ 0.77
TRIM47Q96LD4 CNN2P3-201ENST00000450201 906 ntBASIC19.83■□□□□ 0.77
TRIM47Q96LD4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 AL136317.3-201ENST00000618497 906 ntBASIC19.83■□□□□ 0.77
TRIM47Q96LD4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM47Q96LD4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 PP12613-201ENST00000424958 2230 ntBASIC19.83■□□□□ 0.76
TRIM47Q96LD4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 AC020916.1-201ENST00000587762 1774 ntBASIC19.83■□□□□ 0.76
TRIM47Q96LD4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.83■□□□□ 0.76
TRIM47Q96LD4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 AC139713.2-201ENST00000641328 2723 ntBASIC19.82■□□□□ 0.76
TRIM47Q96LD4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 BASP1P1-201ENST00000430708 665 ntBASIC19.82■□□□□ 0.76
TRIM47Q96LD4 TSPY16P-201ENST00000449843 468 ntBASIC19.82■□□□□ 0.76
TRIM47Q96LD4 UGT1A2P-201ENST00000454886 866 ntBASIC19.82■□□□□ 0.76
TRIM47Q96LD4 IGHV3-52-201ENST00000519770 353 ntBASIC19.82■□□□□ 0.76
TRIM47Q96LD4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM47Q96LD4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms