Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 AC099398.1-201ENST00000567919 2776 ntBASIC17.48■□□□□ 0.39
HDAC11Q96DB2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 AC004870.1-201ENST00000315132 882 ntBASIC17.48■□□□□ 0.39
HDAC11Q96DB2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 KRT18P27-201ENST00000427733 1299 ntBASIC17.48■□□□□ 0.39
HDAC11Q96DB2 RPS2P1-201ENST00000434010 821 ntBASIC17.48■□□□□ 0.39
HDAC11Q96DB2 FAAHP1-202ENST00000446499 1238 ntBASIC17.48■□□□□ 0.39
HDAC11Q96DB2 PAWRP1-201ENST00000451083 565 ntBASIC17.48■□□□□ 0.39
HDAC11Q96DB2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 RNPS1P1-201ENST00000507437 918 ntBASIC17.48■□□□□ 0.39
HDAC11Q96DB2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC11Q96DB2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AC079781.3-201ENST00000449110 356 ntBASIC17.47■□□□□ 0.39
HDAC11Q96DB2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 OR7E14P-202ENST00000530490 1290 ntBASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 KRT126P-201ENST00000549467 1181 ntBASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AL805961.1-202ENST00000641562 540 ntBASIC17.47■□□□□ 0.39
HDAC11Q96DB2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
HDAC11Q96DB2 AC011676.5-201ENST00000624864 2660 ntBASIC17.46■□□□□ 0.39
HDAC11Q96DB2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 AC006504.4-201ENST00000592118 1568 ntBASIC17.46■□□□□ 0.39
HDAC11Q96DB2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.46■□□□□ 0.39
HDAC11Q96DB2 KRT18P67-201ENST00000432816 1264 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms