Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 AC087163.2-201ENST00000457299 853 ntBASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 HLA-J-202ENST00000469281 1241 ntBASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 UNC93B7-201ENST00000509439 705 ntBASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 AC002310.6-201ENST00000624451 1377 ntBASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 ELK2BP-201ENST00000415014 1224 ntBASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 IFNL4P1-201ENST00000607083 540 ntBASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 REXO1L3P-201ENST00000622202 1288 ntBASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.93■□□□□ 0.94
CHD1LQ86WJ1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 LINC01711-201ENST00000598340 967 ntBASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 AC107918.4-202ENST00000641623 219 ntBASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 SNX33P1-201ENST00000592116 1762 ntBASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD1LQ86WJ1 AC092364.2-201ENST00000596710 2692 ntBASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 LAGE3P1-201ENST00000425356 484 ntBASIC20.91■□□□□ 0.94
CHD1LQ86WJ1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms