Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 SCARNA2-201ENST00000458748 420 ntBASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 AC139887.3-201ENST00000568585 713 ntBASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 AL162727.3-201ENST00000635661 2787 ntBASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST2H3AQ71DI3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 AP002490.2-201ENST00000524791 560 ntBASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 LINC01711-201ENST00000598340 967 ntBASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 AC004706.3-202ENST00000621574 984 ntBASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 AC012313.10-201ENST00000623509 926 ntBASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 AC243591.1-201ENST00000452967 1364 ntBASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST2H3AQ71DI3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 KRT18P56-201ENST00000507275 550 ntBASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 AC025062.2-201ENST00000605477 670 ntBASIC14.92□□□□□ -0.02
HIST2H3AQ71DI3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms