Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTCHD4Q6ZW05 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 AC022188.1-201ENST00000620960 1664 ntBASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 TSPY22P-201ENST00000427496 604 ntBASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 AC007967.3-201ENST00000434308 558 ntBASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 RN7SL606P-201ENST00000472779 293 ntBASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 AC092364.2-201ENST00000596710 2692 ntBASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTCHD4Q6ZW05 EGFEM1P-202ENST00000431685 1563 ntBASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 AC068587.6-202ENST00000641839 5619 ntBASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 AL845331.1-201ENST00000424978 1190 ntBASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 GUSBP12-201ENST00000513727 720 ntBASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 AC109462.3-201ENST00000573934 613 ntBASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 AC019129.2-201ENST00000609837 1235 ntBASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 AL592071.1-201ENST00000611956 408 ntBASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTCHD4Q6ZW05 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms