Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 AC005829.1-201ENST00000570002 483 ntBASIC20.62■□□□□ 0.89
TNNI3KQ59H18 MIR3687-2-201ENST00000577708 61 ntBASIC20.62■□□□□ 0.89
TNNI3KQ59H18 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 U1.21-201ENST00000580816 167 ntBASIC20.62■□□□□ 0.89
TNNI3KQ59H18 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 MIR3687-1-201ENST00000614492 61 ntBASIC20.62■□□□□ 0.89
TNNI3KQ59H18 AP001350.2-201ENST00000625104 1094 ntBASIC20.62■□□□□ 0.89
TNNI3KQ59H18 AC092902.6-201ENST00000641783 218 ntBASIC20.62■□□□□ 0.89
TNNI3KQ59H18 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TNNI3KQ59H18 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 AL671710.1-201ENST00000610245 2349 ntBASIC20.61■□□□□ 0.89
TNNI3KQ59H18 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 MIR1233-2-201ENST00000408138 82 ntBASIC20.61■□□□□ 0.89
TNNI3KQ59H18 MIR1233-1-201ENST00000408722 82 ntBASIC20.61■□□□□ 0.89
TNNI3KQ59H18 MKNK2P1-201ENST00000437526 628 ntBASIC20.61■□□□□ 0.89
TNNI3KQ59H18 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 AC006538.3-201ENST00000612495 578 ntBASIC20.61■□□□□ 0.89
TNNI3KQ59H18 AC139530.3-201ENST00000620344 690 ntBASIC20.61■□□□□ 0.89
TNNI3KQ59H18 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNNI3KQ59H18 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 AL009183.1-201ENST00000603760 355 ntBASIC20.6■□□□□ 0.89
TNNI3KQ59H18 AL031055.1-201ENST00000606362 631 ntBASIC20.6■□□□□ 0.89
TNNI3KQ59H18 AC099522.2-201ENST00000607001 744 ntBASIC20.6■□□□□ 0.89
TNNI3KQ59H18 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 HCG11-201ENST00000411553 5696 ntBASIC20.6■□□□□ 0.89
TNNI3KQ59H18 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TNNI3KQ59H18 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms