Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ERCC6LQ2NKX8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 AL158047.1-201ENST00000445918 881 ntBASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 AL353719.1-201ENST00000566847 864 ntBASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 SNX18-202ENST00000343017 3140 ntBASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.01■□□□□ 0.47
ERCC6LQ2NKX8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 PPT1-215ENST00000641471 2368 ntBASIC18■□□□□ 0.47
ERCC6LQ2NKX8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 HES2-202ENST00000377836 507 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 PVRIG2P-201ENST00000435460 978 ntBASIC18■□□□□ 0.47
ERCC6LQ2NKX8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 AC116562.2-201ENST00000507042 360 ntBASIC18■□□□□ 0.47
ERCC6LQ2NKX8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 AP002490.2-201ENST00000524791 560 ntBASIC18■□□□□ 0.47
ERCC6LQ2NKX8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 AC024243.1-201ENST00000609234 778 ntBASIC18■□□□□ 0.47
ERCC6LQ2NKX8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
ERCC6LQ2NKX8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms