Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 AC007274.1-201ENST00000439805 662 ntBASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 MEIS3P1-201ENST00000495167 958 ntBASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 SLC25A6P2-201ENST00000497974 877 ntBASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CTC1Q2NKJ3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 SLC25A39P2-201ENST00000537614 270 ntBASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 CR383656.12-201ENST00000549567 513 ntBASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 AL645728.2-201ENST00000641974 660 ntBASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 AKAP8P1-201ENST00000434743 1349 ntBASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTC1Q2NKJ3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 AC125807.1-201ENST00000483097 614 ntBASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 DUX4L17-201ENST00000557360 1267 ntBASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTC1Q2NKJ3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 AC009949.1-201ENST00000623048 1830 ntBASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTC1Q2NKJ3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms