Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.88□□□□□ -0.19
SPCS3P61009 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.88□□□□□ -0.19
SPCS3P61009 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SPCS3P61009 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.88□□□□□ -0.19
SPCS3P61009 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.88□□□□□ -0.19
SPCS3P61009 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 RNF216P1-203ENST00000404404 2427 ntBASIC13.88□□□□□ -0.19
SPCS3P61009 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 HOMER2P1-201ENST00000455653 964 ntBASIC13.88□□□□□ -0.19
SPCS3P61009 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.88□□□□□ -0.19
SPCS3P61009 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.88□□□□□ -0.19
SPCS3P61009 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.88□□□□□ -0.19
SPCS3P61009 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.88□□□□□ -0.19
SPCS3P61009 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.88□□□□□ -0.19
SPCS3P61009 AC139887.4-201ENST00000607877 719 ntBASIC13.88□□□□□ -0.19
SPCS3P61009 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.88□□□□□ -0.19
SPCS3P61009 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.88□□□□□ -0.19
SPCS3P61009 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.88□□□□□ -0.19
SPCS3P61009 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SPCS3P61009 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPCS3P61009 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SPCS3P61009 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.87□□□□□ -0.19
SPCS3P61009 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SPCS3P61009 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.87□□□□□ -0.19
SPCS3P61009 Z83836.1-201ENST00000624605 1642 ntBASIC13.87□□□□□ -0.19
SPCS3P61009 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SPCS3P61009 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 AC087499.1-201ENST00000418141 1075 ntBASIC13.87□□□□□ -0.19
SPCS3P61009 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 GUSBP12-201ENST00000513727 720 ntBASIC13.87□□□□□ -0.19
SPCS3P61009 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SPCS3P61009 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.87□□□□□ -0.19
SPCS3P61009 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.87□□□□□ -0.19
SPCS3P61009 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SPCS3P61009 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.87□□□□□ -0.19
SPCS3P61009 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.87□□□□□ -0.19
SPCS3P61009 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.87□□□□□ -0.19
SPCS3P61009 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.87□□□□□ -0.19
SPCS3P61009 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.87□□□□□ -0.19
SPCS3P61009 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SPCS3P61009 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPCS3P61009 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
SPCS3P61009 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.86□□□□□ -0.19
SPCS3P61009 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.86□□□□□ -0.19
SPCS3P61009 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.86□□□□□ -0.19
SPCS3P61009 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.86□□□□□ -0.19
SPCS3P61009 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.86□□□□□ -0.19
SPCS3P61009 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.86□□□□□ -0.19
SPCS3P61009 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.86□□□□□ -0.19
SPCS3P61009 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.86□□□□□ -0.19
SPCS3P61009 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SPCS3P61009 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPCS3P61009 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.86□□□□□ -0.19
SPCS3P61009 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.86□□□□□ -0.19
SPCS3P61009 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.86□□□□□ -0.19
SPCS3P61009 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SPCS3P61009 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms