Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 HCG4B-203ENST00000450128 991 ntBASIC19.44■□□□□ 0.7
CHMP4BP1P59074 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHMP4BP1P59074 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 MRPL20P1-201ENST00000400819 433 ntBASIC19.43■□□□□ 0.7
CHMP4BP1P59074 LINC00982-205ENST00000420957 435 ntBASIC19.43■□□□□ 0.7
CHMP4BP1P59074 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP4BP1P59074 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 AC018695.7-201ENST00000624587 2492 ntBASIC19.42■□□□□ 0.7
CHMP4BP1P59074 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 AC009336.1-201ENST00000608941 1553 ntBASIC19.42■□□□□ 0.7
CHMP4BP1P59074 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 CEND1P1-201ENST00000451006 455 ntBASIC19.42■□□□□ 0.7
CHMP4BP1P59074 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 AC004877.2-201ENST00000623941 599 ntBASIC19.42■□□□□ 0.7
CHMP4BP1P59074 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP4BP1P59074 BCAR1-209ENST00000546196 1340 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms