Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RAD23BP54727 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.15■□□□□ 0.5
RAD23BP54727 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RAD23BP54727 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RAD23BP54727 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.15■□□□□ 0.5
RAD23BP54727 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.15■□□□□ 0.5
RAD23BP54727 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.15■□□□□ 0.5
RAD23BP54727 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAD23BP54727 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.15■□□□□ 0.5
RAD23BP54727 AL590627.1-203ENST00000421194 1026 ntBASIC18.15■□□□□ 0.5
RAD23BP54727 AC009947.1-201ENST00000444350 727 ntBASIC18.15■□□□□ 0.5
RAD23BP54727 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.15■□□□□ 0.5
RAD23BP54727 BX640515.1-201ENST00000617215 977 ntBASIC18.15■□□□□ 0.5
RAD23BP54727 AC004790.2-201ENST00000623588 572 ntBASIC18.15■□□□□ 0.5
RAD23BP54727 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RAD23BP54727 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.15■□□□□ 0.5
RAD23BP54727 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD23BP54727 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAD23BP54727 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.15■□□□□ 0.5
RAD23BP54727 AC002310.6-201ENST00000624451 1377 ntBASIC18.15■□□□□ 0.5
RAD23BP54727 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.15■□□□□ 0.5
RAD23BP54727 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RAD23BP54727 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.5
RAD23BP54727 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RAD23BP54727 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
RAD23BP54727 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.14■□□□□ 0.49
RAD23BP54727 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
RAD23BP54727 AC108751.1-201ENST00000490852 363 ntBASIC18.14■□□□□ 0.49
RAD23BP54727 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.14■□□□□ 0.49
RAD23BP54727 OR7E47P-204ENST00000575924 449 ntBASIC18.14■□□□□ 0.49
RAD23BP54727 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RAD23BP54727 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.14■□□□□ 0.49
RAD23BP54727 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.14■□□□□ 0.49
RAD23BP54727 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RAD23BP54727 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.14■□□□□ 0.49
RAD23BP54727 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.14■□□□□ 0.49
RAD23BP54727 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAD23BP54727 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RAD23BP54727 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.13■□□□□ 0.49
RAD23BP54727 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAD23BP54727 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAD23BP54727 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.13■□□□□ 0.49
RAD23BP54727 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.13■□□□□ 0.49
RAD23BP54727 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.13■□□□□ 0.49
RAD23BP54727 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.13■□□□□ 0.49
RAD23BP54727 AC145285.3-201ENST00000564603 959 ntBASIC18.13■□□□□ 0.49
RAD23BP54727 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.13■□□□□ 0.49
RAD23BP54727 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RAD23BP54727 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.13■□□□□ 0.49
RAD23BP54727 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.13■□□□□ 0.49
RAD23BP54727 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.13■□□□□ 0.49
RAD23BP54727 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.13■□□□□ 0.49
RAD23BP54727 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.13■□□□□ 0.49
RAD23BP54727 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RAD23BP54727 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.13■□□□□ 0.49
RAD23BP54727 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAD23BP54727 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.13■□□□□ 0.49
RAD23BP54727 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.13■□□□□ 0.49
RAD23BP54727 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.12■□□□□ 0.49
RAD23BP54727 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RAD23BP54727 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RAD23BP54727 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RAD23BP54727 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.12■□□□□ 0.49
RAD23BP54727 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms