Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLTCL1P53675 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC23.95■■□□□ 1.42
CLTCL1P53675 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC23.95■■□□□ 1.42
CLTCL1P53675 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC23.95■■□□□ 1.42
CLTCL1P53675 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
CLTCL1P53675 CECR7-204ENST00000609932 568 ntTSL 2 BASIC23.95■■□□□ 1.42
CLTCL1P53675 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC23.95■■□□□ 1.42
CLTCL1P53675 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLTCL1P53675 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLTCL1P53675 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC23.94■■□□□ 1.42
CLTCL1P53675 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CLTCL1P53675 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CLTCL1P53675 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLTCL1P53675 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CLTCL1P53675 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLTCL1P53675 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLTCL1P53675 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLTCL1P53675 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLTCL1P53675 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC23.94■■□□□ 1.42
CLTCL1P53675 RNA5SP410-201ENST00000516285 106 ntBASIC23.94■■□□□ 1.42
CLTCL1P53675 MPI-209ENST00000564003 1195 ntTSL 2 BASIC23.94■■□□□ 1.42
CLTCL1P53675 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC23.94■■□□□ 1.42
CLTCL1P53675 COX11-202ENST00000571584 1108 ntTSL 2 BASIC23.94■■□□□ 1.42
CLTCL1P53675 RPS15-212ENST00000593052 629 ntTSL 2 BASIC23.94■■□□□ 1.42
CLTCL1P53675 AC009118.2-201ENST00000613275 655 ntBASIC23.94■■□□□ 1.42
CLTCL1P53675 AC025048.6-201ENST00000634326 1161 ntBASIC23.94■■□□□ 1.42
CLTCL1P53675 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC23.94■■□□□ 1.42
CLTCL1P53675 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC23.94■■□□□ 1.42
CLTCL1P53675 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CLTCL1P53675 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC23.94■■□□□ 1.42
CLTCL1P53675 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC23.94■■□□□ 1.42
CLTCL1P53675 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLTCL1P53675 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLTCL1P53675 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLTCL1P53675 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLTCL1P53675 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CLTCL1P53675 GRAMD4P3-201ENST00000621665 1669 ntBASIC23.93■■□□□ 1.42
CLTCL1P53675 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLTCL1P53675 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CLTCL1P53675 AL353705.2-201ENST00000428243 662 ntBASIC23.93■■□□□ 1.42
CLTCL1P53675 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLTCL1P53675 MEIS3P1-201ENST00000495167 958 ntBASIC23.93■■□□□ 1.42
CLTCL1P53675 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLTCL1P53675 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC23.93■■□□□ 1.42
CLTCL1P53675 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLTCL1P53675 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC23.93■■□□□ 1.42
CLTCL1P53675 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLTCL1P53675 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC23.93■■□□□ 1.42
CLTCL1P53675 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC23.93■■□□□ 1.42
CLTCL1P53675 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
CLTCL1P53675 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLTCL1P53675 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC23.93■■□□□ 1.42
CLTCL1P53675 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 DPM2-202ENST00000373110 738 ntTSL 2 BASIC23.92■■□□□ 1.42
CLTCL1P53675 GRAP-202ENST00000395635 834 ntTSL 2 BASIC23.92■■□□□ 1.42
CLTCL1P53675 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC23.92■■□□□ 1.42
CLTCL1P53675 WASH4P-201ENST00000564273 1246 ntBASIC23.92■■□□□ 1.42
CLTCL1P53675 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC23.92■■□□□ 1.42
CLTCL1P53675 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC23.92■■□□□ 1.42
CLTCL1P53675 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CLTCL1P53675 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 KRT8P39-201ENST00000396270 1433 ntBASIC23.92■■□□□ 1.42
CLTCL1P53675 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC23.92■■□□□ 1.42
CLTCL1P53675 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLTCL1P53675 COX5BP8-201ENST00000416911 349 ntBASIC23.92■■□□□ 1.42
CLTCL1P53675 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC23.92■■□□□ 1.42
CLTCL1P53675 GAPDHP21-201ENST00000450301 1010 ntBASIC23.92■■□□□ 1.42
CLTCL1P53675 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CLTCL1P53675 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC23.92■■□□□ 1.42
CLTCL1P53675 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTCL1P53675 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC23.91■■□□□ 1.42
CLTCL1P53675 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTCL1P53675 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CLTCL1P53675 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTCL1P53675 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTCL1P53675 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTCL1P53675 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CLTCL1P53675 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTCL1P53675 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC23.91■■□□□ 1.42
CLTCL1P53675 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC23.91■■□□□ 1.42
CLTCL1P53675 RPL37AP1-201ENST00000412502 279 ntBASIC23.91■■□□□ 1.42
CLTCL1P53675 AC093724.1-201ENST00000448659 1027 ntBASIC23.91■■□□□ 1.42
CLTCL1P53675 RN7SL692P-201ENST00000464677 288 ntBASIC23.91■■□□□ 1.42
CLTCL1P53675 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CLTCL1P53675 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC23.91■■□□□ 1.42
CLTCL1P53675 SRP9-204ENST00000619790 377 ntTSL 2 BASIC23.91■■□□□ 1.42
CLTCL1P53675 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTCL1P53675 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLTCL1P53675 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
CLTCL1P53675 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms