Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDX1P52945 AC046185.3-201ENST00000623228 1824 ntBASIC16.49■□□□□ 0.23
PDX1P52945 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.49■□□□□ 0.23
PDX1P52945 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.49■□□□□ 0.23
PDX1P52945 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDX1P52945 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PDX1P52945 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDX1P52945 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDX1P52945 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDX1P52945 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDX1P52945 AL121761.2-201ENST00000598007 1648 ntBASIC16.48■□□□□ 0.23
PDX1P52945 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.48■□□□□ 0.23
PDX1P52945 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.48■□□□□ 0.23
PDX1P52945 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.48■□□□□ 0.23
PDX1P52945 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PDX1P52945 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.48■□□□□ 0.23
PDX1P52945 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 HLA-J-203ENST00000494367 1087 ntBASIC16.48■□□□□ 0.23
PDX1P52945 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.48■□□□□ 0.23
PDX1P52945 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.48■□□□□ 0.23
PDX1P52945 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.48■□□□□ 0.23
PDX1P52945 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.48■□□□□ 0.23
PDX1P52945 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 AC011467.4-201ENST00000594891 528 ntBASIC16.48■□□□□ 0.23
PDX1P52945 AC092364.2-202ENST00000597012 1073 ntBASIC16.48■□□□□ 0.23
PDX1P52945 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.48■□□□□ 0.23
PDX1P52945 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.48■□□□□ 0.23
PDX1P52945 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PDX1P52945 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.48■□□□□ 0.23
PDX1P52945 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.48■□□□□ 0.23
PDX1P52945 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PDX1P52945 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDX1P52945 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PDX1P52945 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PDX1P52945 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PDX1P52945 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PDX1P52945 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.47■□□□□ 0.23
PDX1P52945 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.47■□□□□ 0.23
PDX1P52945 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.47■□□□□ 0.23
PDX1P52945 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.47■□□□□ 0.23
PDX1P52945 AC023141.5-201ENST00000458585 616 ntBASIC16.47■□□□□ 0.23
PDX1P52945 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.47■□□□□ 0.23
PDX1P52945 AC109322.1-201ENST00000524499 1264 ntBASIC16.47■□□□□ 0.23
PDX1P52945 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.47■□□□□ 0.23
PDX1P52945 AC093512.1-201ENST00000617969 520 ntBASIC16.47■□□□□ 0.23
PDX1P52945 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDX1P52945 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.47■□□□□ 0.23
PDX1P52945 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PDX1P52945 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
PDX1P52945 AC108860.2-201ENST00000562760 2183 ntBASIC16.47■□□□□ 0.23
PDX1P52945 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDX1P52945 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.47■□□□□ 0.23
PDX1P52945 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.47■□□□□ 0.23
PDX1P52945 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.47■□□□□ 0.23
PDX1P52945 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDX1P52945 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDX1P52945 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDX1P52945 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.46■□□□□ 0.23
PDX1P52945 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDX1P52945 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.46■□□□□ 0.23
PDX1P52945 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDX1P52945 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDX1P52945 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDX1P52945 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDX1P52945 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDX1P52945 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms