Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.69■□□□□ 0.26
GTF2A1P52655 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.69■□□□□ 0.26
GTF2A1P52655 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
GTF2A1P52655 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.69■□□□□ 0.26
GTF2A1P52655 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GTF2A1P52655 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GTF2A1P52655 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.69■□□□□ 0.26
GTF2A1P52655 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GTF2A1P52655 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
GTF2A1P52655 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GTF2A1P52655 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.69■□□□□ 0.26
GTF2A1P52655 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 AC092368.3-202ENST00000574180 1591 ntBASIC16.68■□□□□ 0.26
GTF2A1P52655 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.68■□□□□ 0.26
GTF2A1P52655 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
GTF2A1P52655 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.68■□□□□ 0.26
GTF2A1P52655 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.68■□□□□ 0.26
GTF2A1P52655 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.68■□□□□ 0.26
GTF2A1P52655 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 AC091874.3-201ENST00000512672 1195 ntBASIC16.68■□□□□ 0.26
GTF2A1P52655 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.68■□□□□ 0.26
GTF2A1P52655 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.68■□□□□ 0.26
GTF2A1P52655 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.68■□□□□ 0.26
GTF2A1P52655 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.68■□□□□ 0.26
GTF2A1P52655 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
GTF2A1P52655 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A1P52655 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GTF2A1P52655 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
GTF2A1P52655 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.68■□□□□ 0.26
GTF2A1P52655 AL023775.1-201ENST00000454907 1746 ntBASIC16.67■□□□□ 0.26
GTF2A1P52655 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 AL356585.2-201ENST00000625078 2396 ntBASIC16.67■□□□□ 0.26
GTF2A1P52655 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GTF2A1P52655 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GTF2A1P52655 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.67■□□□□ 0.26
GTF2A1P52655 MIR663A-201ENST00000385250 93 ntBASIC16.67■□□□□ 0.26
GTF2A1P52655 TSPY21P-201ENST00000433481 731 ntBASIC16.67■□□□□ 0.26
GTF2A1P52655 TSPY23P-201ENST00000440136 739 ntBASIC16.67■□□□□ 0.26
GTF2A1P52655 CDCA4P2-201ENST00000441182 718 ntBASIC16.67■□□□□ 0.26
GTF2A1P52655 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
GTF2A1P52655 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms