Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6CP51160 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6CP51160 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PDE6CP51160 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.37■□□□□ 0.53
PDE6CP51160 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDE6CP51160 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.37■□□□□ 0.53
PDE6CP51160 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 MIR574-201ENST00000385209 96 ntBASIC18.36■□□□□ 0.53
PDE6CP51160 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6CP51160 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 FRMD8P1-201ENST00000440433 1524 ntBASIC18.36■□□□□ 0.53
PDE6CP51160 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDE6CP51160 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.36■□□□□ 0.53
PDE6CP51160 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.36■□□□□ 0.53
PDE6CP51160 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.36■□□□□ 0.53
PDE6CP51160 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PDE6CP51160 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.36■□□□□ 0.53
PDE6CP51160 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 PGM5P2-202ENST00000637225 1043 ntBASIC18.36■□□□□ 0.53
PDE6CP51160 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PDE6CP51160 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PDE6CP51160 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDE6CP51160 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6CP51160 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.35■□□□□ 0.53
PDE6CP51160 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6CP51160 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDE6CP51160 LINC00982-205ENST00000420957 435 ntBASIC18.35■□□□□ 0.53
PDE6CP51160 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDE6CP51160 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDE6CP51160 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.35■□□□□ 0.53
PDE6CP51160 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.35■□□□□ 0.53
PDE6CP51160 SLC25A1P1-201ENST00000528351 927 ntBASIC18.35■□□□□ 0.53
PDE6CP51160 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.35■□□□□ 0.53
PDE6CP51160 AC145285.3-201ENST00000564603 959 ntBASIC18.35■□□□□ 0.53
PDE6CP51160 AC023511.2-201ENST00000618803 211 ntBASIC18.35■□□□□ 0.53
PDE6CP51160 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.35■□□□□ 0.53
PDE6CP51160 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
PDE6CP51160 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6CP51160 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6CP51160 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
PDE6CP51160 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.35■□□□□ 0.53
PDE6CP51160 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDE6CP51160 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6CP51160 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PDE6CP51160 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.34■□□□□ 0.53
PDE6CP51160 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDE6CP51160 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 BX005266.1-201ENST00000473402 457 ntBASIC18.34■□□□□ 0.53
PDE6CP51160 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.34■□□□□ 0.53
PDE6CP51160 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.34■□□□□ 0.53
PDE6CP51160 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6CP51160 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6CP51160 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.34■□□□□ 0.53
PDE6CP51160 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.34■□□□□ 0.53
PDE6CP51160 MIR1199-201ENST00000621445 119 ntBASIC18.34■□□□□ 0.53
PDE6CP51160 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms