Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF144AP50876 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF144AP50876 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RNF144AP50876 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RNF144AP50876 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF144AP50876 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF144AP50876 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
RNF144AP50876 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF144AP50876 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF144AP50876 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF144AP50876 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.81■□□□□ 0.12
RNF144AP50876 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
RNF144AP50876 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF144AP50876 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF144AP50876 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF144AP50876 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 SAPCD2P3-201ENST00000455031 850 ntBASIC15.81■□□□□ 0.12
RNF144AP50876 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF144AP50876 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF144AP50876 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF144AP50876 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
RNF144AP50876 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.81■□□□□ 0.12
RNF144AP50876 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF144AP50876 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF144AP50876 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF144AP50876 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF144AP50876 PCDHA14-201ENST00000506751 2298 ntBASIC15.8■□□□□ 0.12
RNF144AP50876 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNF144AP50876 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
RNF144AP50876 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 FRMD8P1-201ENST00000440433 1524 ntBASIC15.8■□□□□ 0.12
RNF144AP50876 SIGLEC16-201ENST00000599858 1437 ntBASIC15.8■□□□□ 0.12
RNF144AP50876 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RNF144AP50876 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
RNF144AP50876 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF144AP50876 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF144AP50876 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.8■□□□□ 0.12
RNF144AP50876 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF144AP50876 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF144AP50876 LINC01711-201ENST00000598340 967 ntBASIC15.8■□□□□ 0.12
RNF144AP50876 MTDHP4-201ENST00000600287 670 ntBASIC15.8■□□□□ 0.12
RNF144AP50876 AC073592.4-201ENST00000623827 446 ntBASIC15.8■□□□□ 0.12
RNF144AP50876 TP73-AS1-207ENST00000624167 988 ntBASIC15.8■□□□□ 0.12
RNF144AP50876 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF144AP50876 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNF144AP50876 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF144AP50876 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF144AP50876 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF144AP50876 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF144AP50876 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms