Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TUBP50607 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TUBP50607 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 UPF3AP3-201ENST00000420996 769 ntBASIC17.89■□□□□ 0.45
TUBP50607 RHOQP3-201ENST00000437982 621 ntBASIC17.89■□□□□ 0.45
TUBP50607 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.89■□□□□ 0.45
TUBP50607 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.89■□□□□ 0.45
TUBP50607 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.89■□□□□ 0.45
TUBP50607 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.89■□□□□ 0.45
TUBP50607 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
TUBP50607 MTDHP5-201ENST00000598980 586 ntBASIC17.89■□□□□ 0.45
TUBP50607 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.89■□□□□ 0.45
TUBP50607 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.89■□□□□ 0.45
TUBP50607 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TUBP50607 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TUBP50607 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TUBP50607 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.89■□□□□ 0.45
TUBP50607 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TUBP50607 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 GPX1P2-201ENST00000429271 606 ntBASIC17.88■□□□□ 0.45
TUBP50607 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.88■□□□□ 0.45
TUBP50607 AC010507.1-201ENST00000633895 436 ntBASIC17.88■□□□□ 0.45
TUBP50607 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBP50607 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TUBP50607 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBP50607 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TUBP50607 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.88■□□□□ 0.45
TUBP50607 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TUBP50607 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.87■□□□□ 0.45
TUBP50607 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
TUBP50607 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TUBP50607 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TUBP50607 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.87■□□□□ 0.45
TUBP50607 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.87■□□□□ 0.45
TUBP50607 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.87■□□□□ 0.45
TUBP50607 RPSAP43-201ENST00000402237 625 ntBASIC17.87■□□□□ 0.45
TUBP50607 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TUBP50607 AC023274.1-201ENST00000418278 595 ntBASIC17.87■□□□□ 0.45
TUBP50607 AC087163.2-201ENST00000457299 853 ntBASIC17.87■□□□□ 0.45
TUBP50607 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.87■□□□□ 0.45
TUBP50607 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.87■□□□□ 0.45
TUBP50607 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TUBP50607 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.87■□□□□ 0.45
TUBP50607 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.87■□□□□ 0.45
TUBP50607 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.87■□□□□ 0.45
TUBP50607 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.87■□□□□ 0.45
TUBP50607 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.87■□□□□ 0.45
TUBP50607 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TUBP50607 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TUBP50607 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.87■□□□□ 0.45
TUBP50607 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TUBP50607 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms