Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CHRNA3P32297 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 FGFR3P6-201ENST00000457012 610 ntBASIC17.92■□□□□ 0.46
CHRNA3P32297 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHRNA3P32297 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.92■□□□□ 0.46
CHRNA3P32297 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.92■□□□□ 0.46
CHRNA3P32297 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHRNA3P32297 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHRNA3P32297 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.92■□□□□ 0.46
CHRNA3P32297 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHRNA3P32297 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA3P32297 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.91■□□□□ 0.46
CHRNA3P32297 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA3P32297 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRNA3P32297 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA3P32297 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.91■□□□□ 0.46
CHRNA3P32297 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.91■□□□□ 0.46
CHRNA3P32297 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRNA3P32297 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA3P32297 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CHRNA3P32297 STK25P1-201ENST00000585406 838 ntBASIC17.91■□□□□ 0.46
CHRNA3P32297 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHRNA3P32297 AC064862.7-201ENST00000604520 867 ntBASIC17.91■□□□□ 0.46
CHRNA3P32297 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.91■□□□□ 0.46
CHRNA3P32297 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA3P32297 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA3P32297 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 AC026691.1-201ENST00000602502 2017 ntBASIC17.91■□□□□ 0.46
CHRNA3P32297 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA3P32297 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA3P32297 AC046158.3-201ENST00000624947 2558 ntBASIC17.9■□□□□ 0.46
CHRNA3P32297 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA3P32297 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA3P32297 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 CYP2T1P-202ENST00000641596 2535 ntBASIC17.9■□□□□ 0.46
CHRNA3P32297 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.9■□□□□ 0.46
CHRNA3P32297 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.9■□□□□ 0.46
CHRNA3P32297 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.9■□□□□ 0.46
CHRNA3P32297 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA3P32297 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA3P32297 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.9■□□□□ 0.46
CHRNA3P32297 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.9■□□□□ 0.46
CHRNA3P32297 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA3P32297 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA3P32297 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms