Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TUBB7P-202ENST00000428444 1305 ntBASIC16.13■□□□□ 0.17
PTPN6P29350 TUBB8P7-204ENST00000567960 1332 ntBASIC16.13■□□□□ 0.17
PTPN6P29350 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PTPN6P29350 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.13■□□□□ 0.17
PTPN6P29350 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.13■□□□□ 0.17
PTPN6P29350 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTPN6P29350 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN6P29350 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.12■□□□□ 0.17
PTPN6P29350 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 AC004817.3-201ENST00000602957 2129 ntBASIC16.12■□□□□ 0.17
PTPN6P29350 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTPN6P29350 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN6P29350 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PTPN6P29350 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.12■□□□□ 0.17
PTPN6P29350 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN6P29350 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
PTPN6P29350 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.12■□□□□ 0.17
PTPN6P29350 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN6P29350 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PTPN6P29350 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN6P29350 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
PTPN6P29350 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN6P29350 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTPN6P29350 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.12■□□□□ 0.17
PTPN6P29350 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN6P29350 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
PTPN6P29350 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN6P29350 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 SPDYE21P-201ENST00000413323 827 ntBASIC16.11■□□□□ 0.17
PTPN6P29350 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.11■□□□□ 0.17
PTPN6P29350 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 AF238378.1-201ENST00000526806 358 ntBASIC16.11■□□□□ 0.17
PTPN6P29350 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN6P29350 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 LINC02199-201ENST00000506655 2702 ntBASIC16.11■□□□□ 0.17
PTPN6P29350 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
PTPN6P29350 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 AC046158.3-201ENST00000624947 2558 ntBASIC16.11■□□□□ 0.17
PTPN6P29350 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN6P29350 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN6P29350 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN6P29350 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN6P29350 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms