Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KCNA3P22001 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
KCNA3P22001 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA3P22001 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KCNA3P22001 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA3P22001 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA3P22001 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA3P22001 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KCNA3P22001 AC055876.2-201ENST00000531834 546 ntBASIC20.54■□□□□ 0.88
KCNA3P22001 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA3P22001 MIR6787-201ENST00000616675 61 ntBASIC20.54■□□□□ 0.88
KCNA3P22001 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNA3P22001 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA3P22001 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA3P22001 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KCNA3P22001 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA3P22001 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNA3P22001 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNA3P22001 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA3P22001 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNA3P22001 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNA3P22001 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
KCNA3P22001 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNA3P22001 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNA3P22001 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.53■□□□□ 0.88
KCNA3P22001 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.53■□□□□ 0.88
KCNA3P22001 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KCNA3P22001 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.53■□□□□ 0.88
KCNA3P22001 CROCCP4-201ENST00000457096 498 ntBASIC20.53■□□□□ 0.88
KCNA3P22001 RN7SL618P-201ENST00000477850 296 ntBASIC20.53■□□□□ 0.88
KCNA3P22001 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNA3P22001 AC023310.3-201ENST00000557027 670 ntBASIC20.53■□□□□ 0.88
KCNA3P22001 AC100756.1-201ENST00000562736 682 ntBASIC20.53■□□□□ 0.88
KCNA3P22001 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNA3P22001 AC138749.3-201ENST00000567691 622 ntBASIC20.53■□□□□ 0.88
KCNA3P22001 AC116165.1-201ENST00000611806 668 ntBASIC20.53■□□□□ 0.88
KCNA3P22001 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
KCNA3P22001 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
KCNA3P22001 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.53■□□□□ 0.88
KCNA3P22001 AC138028.4-201ENST00000564984 1845 ntBASIC20.53■□□□□ 0.88
KCNA3P22001 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KCNA3P22001 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KCNA3P22001 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA3P22001 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
KCNA3P22001 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNA3P22001 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA3P22001 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNA3P22001 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA3P22001 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA3P22001 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
KCNA3P22001 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNA3P22001 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
KCNA3P22001 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA3P22001 ACTBP11-201ENST00000436287 1126 ntBASIC20.52■□□□□ 0.88
KCNA3P22001 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.52■□□□□ 0.88
KCNA3P22001 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA3P22001 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNA3P22001 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNA3P22001 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.52■□□□□ 0.88
KCNA3P22001 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA3P22001 AC133552.6-201ENST00000613406 534 ntBASIC20.52■□□□□ 0.88
KCNA3P22001 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNA3P22001 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
KCNA3P22001 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA3P22001 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
KCNA3P22001 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
KCNA3P22001 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.52■□□□□ 0.87
KCNA3P22001 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNA3P22001 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
KCNA3P22001 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA3P22001 EGFEM1P-202ENST00000431685 1563 ntBASIC20.51■□□□□ 0.87
KCNA3P22001 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNA3P22001 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA3P22001 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
KCNA3P22001 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
KCNA3P22001 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNA3P22001 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.51■□□□□ 0.87
KCNA3P22001 AC098859.1-201ENST00000502915 1238 ntBASIC20.51■□□□□ 0.87
KCNA3P22001 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNA3P22001 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA3P22001 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
KCNA3P22001 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNA3P22001 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNA3P22001 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA3P22001 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA3P22001 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA3P22001 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA3P22001 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms