Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL11A2P13942 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL11A2P13942 ELK1P1-201ENST00000485699 580 ntBASIC20.41■□□□□ 0.86
COL11A2P13942 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.41■□□□□ 0.86
COL11A2P13942 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.41■□□□□ 0.86
COL11A2P13942 MIR4259-201ENST00000584466 101 ntBASIC20.41■□□□□ 0.86
COL11A2P13942 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.41■□□□□ 0.86
COL11A2P13942 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.41■□□□□ 0.86
COL11A2P13942 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.41■□□□□ 0.86
COL11A2P13942 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.41■□□□□ 0.86
COL11A2P13942 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
COL11A2P13942 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.41■□□□□ 0.86
COL11A2P13942 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.41■□□□□ 0.86
COL11A2P13942 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 AL138688.1-201ENST00000624851 1594 ntBASIC20.41■□□□□ 0.86
COL11A2P13942 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
COL11A2P13942 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
COL11A2P13942 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.41■□□□□ 0.86
COL11A2P13942 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.41■□□□□ 0.86
COL11A2P13942 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.41■□□□□ 0.86
COL11A2P13942 USP32P1-208ENST00000506594 1164 ntBASIC20.41■□□□□ 0.86
COL11A2P13942 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.41■□□□□ 0.86
COL11A2P13942 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.41■□□□□ 0.86
COL11A2P13942 AC099568.2-201ENST00000609194 695 ntBASIC20.41■□□□□ 0.86
COL11A2P13942 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.41■□□□□ 0.86
COL11A2P13942 RPSAP52-203ENST00000622976 1023 ntBASIC20.41■□□□□ 0.86
COL11A2P13942 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL11A2P13942 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 KRT8P12-202ENST00000472924 1397 ntBASIC20.4■□□□□ 0.86
COL11A2P13942 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.4■□□□□ 0.86
COL11A2P13942 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
COL11A2P13942 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.4■□□□□ 0.86
COL11A2P13942 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COL11A2P13942 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.4■□□□□ 0.86
COL11A2P13942 RN7SL752P-201ENST00000463779 287 ntBASIC20.4■□□□□ 0.86
COL11A2P13942 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.4■□□□□ 0.86
COL11A2P13942 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.4■□□□□ 0.86
COL11A2P13942 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COL11A2P13942 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.4■□□□□ 0.86
COL11A2P13942 CTBP2P3-201ENST00000585629 1255 ntBASIC20.4■□□□□ 0.86
COL11A2P13942 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.4■□□□□ 0.86
COL11A2P13942 SRD5A3P1-201ENST00000603021 949 ntBASIC20.4■□□□□ 0.86
COL11A2P13942 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.4■□□□□ 0.86
COL11A2P13942 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COL11A2P13942 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL11A2P13942 AC016396.2-201ENST00000562575 1417 ntBASIC20.4■□□□□ 0.86
COL11A2P13942 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL11A2P13942 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
COL11A2P13942 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
COL11A2P13942 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL11A2P13942 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.39■□□□□ 0.86
COL11A2P13942 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
COL11A2P13942 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.39■□□□□ 0.86
COL11A2P13942 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.39■□□□□ 0.86
COL11A2P13942 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL11A2P13942 KRT223P-202ENST00000449164 1292 ntBASIC20.39■□□□□ 0.86
COL11A2P13942 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL11A2P13942 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
COL11A2P13942 TPRX2P-201ENST00000535362 881 ntBASIC20.39■□□□□ 0.86
COL11A2P13942 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.39■□□□□ 0.86
COL11A2P13942 AL109936.8-201ENST00000641772 604 ntBASIC20.39■□□□□ 0.86
COL11A2P13942 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL11A2P13942 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL11A2P13942 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL11A2P13942 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL11A2P13942 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL11A2P13942 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.39■□□□□ 0.85
COL11A2P13942 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.39■□□□□ 0.85
COL11A2P13942 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL11A2P13942 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.39■□□□□ 0.85
COL11A2P13942 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.39■□□□□ 0.85
COL11A2P13942 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL11A2P13942 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
COL11A2P13942 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.39■□□□□ 0.85
COL11A2P13942 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.39■□□□□ 0.85
COL11A2P13942 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL11A2P13942 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms