Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
KRT3P12035 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT3P12035 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
KRT3P12035 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
KRT3P12035 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.89■□□□□ 0.46
KRT3P12035 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
KRT3P12035 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
KRT3P12035 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.46
KRT3P12035 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.89■□□□□ 0.45
KRT3P12035 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
KRT3P12035 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
KRT3P12035 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
KRT3P12035 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.89■□□□□ 0.45
KRT3P12035 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.89■□□□□ 0.45
KRT3P12035 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.89■□□□□ 0.45
KRT3P12035 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.89■□□□□ 0.45
KRT3P12035 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
KRT3P12035 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 ELK2BP-201ENST00000415014 1224 ntBASIC17.89■□□□□ 0.45
KRT3P12035 AC079781.3-201ENST00000449110 356 ntBASIC17.89■□□□□ 0.45
KRT3P12035 PAWRP1-201ENST00000451083 565 ntBASIC17.89■□□□□ 0.45
KRT3P12035 KRT126P-201ENST00000549467 1181 ntBASIC17.89■□□□□ 0.45
KRT3P12035 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.89■□□□□ 0.45
KRT3P12035 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.89■□□□□ 0.45
KRT3P12035 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.89■□□□□ 0.45
KRT3P12035 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
KRT3P12035 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.89■□□□□ 0.45
KRT3P12035 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.89■□□□□ 0.45
KRT3P12035 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT3P12035 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.89■□□□□ 0.45
KRT3P12035 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT3P12035 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
KRT3P12035 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
KRT3P12035 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 FAAHP1-202ENST00000446499 1238 ntBASIC17.88■□□□□ 0.45
KRT3P12035 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
KRT3P12035 AF186996.4-201ENST00000467186 377 ntBASIC17.88■□□□□ 0.45
KRT3P12035 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 AP002490.2-201ENST00000524791 560 ntBASIC17.88■□□□□ 0.45
KRT3P12035 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT3P12035 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.88■□□□□ 0.45
KRT3P12035 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 PI4KAP1-204ENST00000612579 1703 ntBASIC17.88■□□□□ 0.45
KRT3P12035 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
KRT3P12035 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT3P12035 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT3P12035 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT3P12035 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT3P12035 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
KRT3P12035 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
KRT3P12035 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT3P12035 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT3P12035 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
KRT3P12035 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.87■□□□□ 0.45
KRT3P12035 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT3P12035 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms