Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TCRAP04437 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.96□□□□□ -0.33
TCRAP04437 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.96□□□□□ -0.33
TCRAP04437 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TCRAP04437 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.96□□□□□ -0.33
TCRAP04437 AC006538.1-201ENST00000567905 1585 ntBASIC12.96□□□□□ -0.33
TCRAP04437 AC009336.1-201ENST00000608941 1553 ntBASIC12.96□□□□□ -0.33
TCRAP04437 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TCRAP04437 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.96□□□□□ -0.33
TCRAP04437 AL359075.1-203ENST00000462729 1002 ntBASIC12.96□□□□□ -0.33
TCRAP04437 AC092597.1-201ENST00000487352 616 ntBASIC12.96□□□□□ -0.33
TCRAP04437 COX11P1-201ENST00000489116 835 ntBASIC12.96□□□□□ -0.33
TCRAP04437 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.96□□□□□ -0.33
TCRAP04437 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.96□□□□□ -0.33
TCRAP04437 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.96□□□□□ -0.33
TCRAP04437 AL390719.2-201ENST00000606993 987 ntBASIC12.96□□□□□ -0.33
TCRAP04437 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TCRAP04437 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.96□□□□□ -0.33
TCRAP04437 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TCRAP04437 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TCRAP04437 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRAP04437 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRAP04437 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
TCRAP04437 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.96□□□□□ -0.34
TCRAP04437 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRAP04437 ME2P1-201ENST00000426028 1970 ntBASIC12.96□□□□□ -0.34
TCRAP04437 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TCRAP04437 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.96□□□□□ -0.34
TCRAP04437 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRAP04437 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TCRAP04437 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRAP04437 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.96□□□□□ -0.34
TCRAP04437 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRAP04437 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TCRAP04437 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TCRAP04437 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TCRAP04437 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TCRAP04437 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 AC103702.1-201ENST00000548801 2630 ntBASIC12.95□□□□□ -0.34
TCRAP04437 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
TCRAP04437 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.95□□□□□ -0.34
TCRAP04437 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.95□□□□□ -0.34
TCRAP04437 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.95□□□□□ -0.34
TCRAP04437 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 STK19B-204ENST00000512515 211 ntBASIC12.95□□□□□ -0.34
TCRAP04437 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.95□□□□□ -0.34
TCRAP04437 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.95□□□□□ -0.34
TCRAP04437 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.95□□□□□ -0.34
TCRAP04437 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TCRAP04437 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 AC024909.3-201ENST00000611513 2257 ntBASIC12.95□□□□□ -0.34
TCRAP04437 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRAP04437 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRAP04437 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TCRAP04437 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.94□□□□□ -0.34
TCRAP04437 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.94□□□□□ -0.34
TCRAP04437 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms