Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALDH1A1P00352 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 RNA5SP410-201ENST00000516285 106 ntBASIC19.14■□□□□ 0.65
ALDH1A1P00352 AC044860.1-202ENST00000559481 777 ntBASIC19.14■□□□□ 0.65
ALDH1A1P00352 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALDH1A1P00352 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALDH1A1P00352 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALDH1A1P00352 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALDH1A1P00352 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALDH1A1P00352 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.14■□□□□ 0.65
ALDH1A1P00352 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 WIZP1-201ENST00000531444 2299 ntBASIC19.13■□□□□ 0.65
ALDH1A1P00352 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 TPRX2P-201ENST00000535362 881 ntBASIC19.13■□□□□ 0.65
ALDH1A1P00352 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 MIR4492-201ENST00000581627 80 ntBASIC19.13■□□□□ 0.65
ALDH1A1P00352 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 SRD5A3P1-201ENST00000603021 949 ntBASIC19.13■□□□□ 0.65
ALDH1A1P00352 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 AC004790.1-201ENST00000612686 536 ntBASIC19.13■□□□□ 0.65
ALDH1A1P00352 MIR6775-201ENST00000617557 69 ntBASIC19.13■□□□□ 0.65
ALDH1A1P00352 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALDH1A1P00352 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ALDH1A1P00352 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.12■□□□□ 0.65
ALDH1A1P00352 AL021920.2-201ENST00000624828 1351 ntBASIC19.12■□□□□ 0.65
ALDH1A1P00352 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
ALDH1A1P00352 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ALDH1A1P00352 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ALDH1A1P00352 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.12■□□□□ 0.65
ALDH1A1P00352 AL512361.1-201ENST00000554200 418 ntBASIC19.12■□□□□ 0.65
ALDH1A1P00352 AC015936.2-201ENST00000593177 259 ntBASIC19.12■□□□□ 0.65
ALDH1A1P00352 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.12■□□□□ 0.65
ALDH1A1P00352 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.12■□□□□ 0.65
ALDH1A1P00352 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALDH1A1P00352 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ALDH1A1P00352 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 EGFEM1P-202ENST00000431685 1563 ntBASIC19.11■□□□□ 0.65
ALDH1A1P00352 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 KRT8P49-201ENST00000604166 1432 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms