Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17■□□□□ 0.31
SHOX2O60902 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SHOX2O60902 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SHOX2O60902 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17■□□□□ 0.31
SHOX2O60902 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17■□□□□ 0.31
SHOX2O60902 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SHOX2O60902 AC009154.2-201ENST00000621177 724 ntBASIC17■□□□□ 0.31
SHOX2O60902 GGT3P-204ENST00000453783 1664 ntBASIC17■□□□□ 0.31
SHOX2O60902 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SHOX2O60902 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17■□□□□ 0.31
SHOX2O60902 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHOX2O60902 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 AC019129.2-201ENST00000609837 1235 ntBASIC16.99■□□□□ 0.31
SHOX2O60902 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SHOX2O60902 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.99■□□□□ 0.31
SHOX2O60902 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SHOX2O60902 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.99■□□□□ 0.31
SHOX2O60902 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHOX2O60902 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.98■□□□□ 0.31
SHOX2O60902 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.98■□□□□ 0.31
SHOX2O60902 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SHOX2O60902 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SHOX2O60902 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.98■□□□□ 0.31
SHOX2O60902 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.98■□□□□ 0.31
SHOX2O60902 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.98■□□□□ 0.31
SHOX2O60902 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.98■□□□□ 0.31
SHOX2O60902 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.98■□□□□ 0.31
SHOX2O60902 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.98■□□□□ 0.31
SHOX2O60902 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHOX2O60902 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.98■□□□□ 0.31
SHOX2O60902 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms