Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PLOD3O60568 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PLOD3O60568 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.05■□□□□ 0.16
PLOD3O60568 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.05■□□□□ 0.16
PLOD3O60568 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.05■□□□□ 0.16
PLOD3O60568 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
PLOD3O60568 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PLOD3O60568 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PLOD3O60568 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PLOD3O60568 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PLOD3O60568 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 AC060834.1-201ENST00000443027 2032 ntBASIC16.04■□□□□ 0.16
PLOD3O60568 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.04■□□□□ 0.16
PLOD3O60568 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.04■□□□□ 0.16
PLOD3O60568 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PLOD3O60568 AC139887.3-201ENST00000568585 713 ntBASIC16.04■□□□□ 0.16
PLOD3O60568 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PLOD3O60568 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PLOD3O60568 FRMD8P1-201ENST00000440433 1524 ntBASIC16.04■□□□□ 0.16
PLOD3O60568 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.03■□□□□ 0.16
PLOD3O60568 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
PLOD3O60568 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PLOD3O60568 AL590787.1-201ENST00000568856 1315 ntBASIC16.03■□□□□ 0.16
PLOD3O60568 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PLOD3O60568 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.03■□□□□ 0.16
PLOD3O60568 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.03■□□□□ 0.16
PLOD3O60568 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.03■□□□□ 0.16
PLOD3O60568 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
PLOD3O60568 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.03■□□□□ 0.16
PLOD3O60568 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.03■□□□□ 0.16
PLOD3O60568 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.03■□□□□ 0.16
PLOD3O60568 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.03■□□□□ 0.16
PLOD3O60568 AC021087.4-201ENST00000563761 564 ntBASIC16.03■□□□□ 0.16
PLOD3O60568 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.03■□□□□ 0.16
PLOD3O60568 AC025062.2-201ENST00000605477 670 ntBASIC16.03■□□□□ 0.16
PLOD3O60568 AL139424.1-201ENST00000607572 797 ntBASIC16.03■□□□□ 0.16
PLOD3O60568 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PLOD3O60568 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PLOD3O60568 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PLOD3O60568 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.02■□□□□ 0.16
PLOD3O60568 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms