Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.19■■□□□ 1.3
CHD2O14647 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC23.19■■□□□ 1.3
CHD2O14647 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD2O14647 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC23.19■■□□□ 1.3
CHD2O14647 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.19■■□□□ 1.3
CHD2O14647 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD2O14647 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD2O14647 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CHD2O14647 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC23.19■■□□□ 1.3
CHD2O14647 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC23.19■■□□□ 1.3
CHD2O14647 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC23.19■■□□□ 1.3
CHD2O14647 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHD2O14647 NEU3-203ENST00000529024 581 ntTSL 3 BASIC23.19■■□□□ 1.3
CHD2O14647 AC015936.2-201ENST00000593177 259 ntBASIC23.19■■□□□ 1.3
CHD2O14647 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHD2O14647 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD2O14647 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
CHD2O14647 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC23.18■■□□□ 1.3
CHD2O14647 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD2O14647 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
CHD2O14647 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD2O14647 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC23.18■■□□□ 1.3
CHD2O14647 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC23.18■■□□□ 1.3
CHD2O14647 AL033527.5-202ENST00000641632 1098 ntBASIC23.18■■□□□ 1.3
CHD2O14647 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
CHD2O14647 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD2O14647 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CHD2O14647 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD2O14647 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD2O14647 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHD2O14647 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD2O14647 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.18■■□□□ 1.3
CHD2O14647 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC23.17■■□□□ 1.3
CHD2O14647 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD2O14647 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC23.17■■□□□ 1.3
CHD2O14647 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CHD2O14647 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC23.17■■□□□ 1.3
CHD2O14647 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
CHD2O14647 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC23.17■■□□□ 1.3
CHD2O14647 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC23.17■■□□□ 1.3
CHD2O14647 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 AL355994.2-201ENST00000447882 704 ntBASIC23.17■■□□□ 1.3
CHD2O14647 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CHD2O14647 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 AL391069.4-201ENST00000609583 481 ntBASIC23.17■■□□□ 1.3
CHD2O14647 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD2O14647 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD2O14647 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD2O14647 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CHD2O14647 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD2O14647 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD2O14647 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD2O14647 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CHD2O14647 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD2O14647 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CHD2O14647 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC23.16■■□□□ 1.3
CHD2O14647 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CHD2O14647 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC23.16■■□□□ 1.3
CHD2O14647 MIR6787-201ENST00000616675 61 ntBASIC23.16■■□□□ 1.3
CHD2O14647 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD2O14647 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD2O14647 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD2O14647 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CHD2O14647 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
CHD2O14647 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CHD2O14647 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC23.15■■□□□ 1.3
CHD2O14647 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CHD2O14647 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC23.15■■□□□ 1.3
CHD2O14647 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC23.15■■□□□ 1.3
CHD2O14647 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC23.15■■□□□ 1.3
CHD2O14647 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CHD2O14647 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 KRT8P44-201ENST00000441609 1350 ntBASIC23.15■■□□□ 1.3
CHD2O14647 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHD2O14647 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CHD2O14647 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms