Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN5O00501 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN5O00501 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN5O00501 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
CLDN5O00501 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN5O00501 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN5O00501 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN5O00501 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN5O00501 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN5O00501 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN5O00501 AP002472.1-201ENST00000577490 586 ntBASIC17.86■□□□□ 0.45
CLDN5O00501 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
CLDN5O00501 MPDU1-223ENST00000582151 728 ntBASIC17.86■□□□□ 0.45
CLDN5O00501 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN5O00501 C20orf181-201ENST00000623918 480 ntBASIC17.86■□□□□ 0.45
CLDN5O00501 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CLDN5O00501 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN5O00501 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 AC012569.1-201ENST00000591191 1524 ntBASIC17.86■□□□□ 0.45
CLDN5O00501 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN5O00501 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN5O00501 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN5O00501 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN5O00501 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLDN5O00501 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 HTR5BP-201ENST00000430851 1154 ntBASIC17.85■□□□□ 0.45
CLDN5O00501 FAM58CP-201ENST00000435741 640 ntBASIC17.85■□□□□ 0.45
CLDN5O00501 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.85■□□□□ 0.45
CLDN5O00501 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN5O00501 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CLDN5O00501 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CLDN5O00501 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN5O00501 AC005829.1-201ENST00000570002 483 ntBASIC17.85■□□□□ 0.45
CLDN5O00501 AL121761.2-201ENST00000598007 1648 ntBASIC17.85■□□□□ 0.45
CLDN5O00501 AC068137.2-201ENST00000605408 478 ntBASIC17.85■□□□□ 0.45
CLDN5O00501 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 AC091812.2-201ENST00000619081 385 ntBASIC17.85■□□□□ 0.45
CLDN5O00501 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN5O00501 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLDN5O00501 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN5O00501 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLDN5O00501 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CLDN5O00501 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 AC131009.4-201ENST00000624048 1740 ntBASIC17.84■□□□□ 0.45
CLDN5O00501 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CLDN5O00501 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN5O00501 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CLDN5O00501 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN5O00501 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN5O00501 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.84■□□□□ 0.45
CLDN5O00501 AL031432.2-201ENST00000566714 459 ntBASIC17.84■□□□□ 0.45
CLDN5O00501 AL928711.1-201ENST00000570165 459 ntBASIC17.84■□□□□ 0.45
CLDN5O00501 AL645728.2-201ENST00000641974 660 ntBASIC17.84■□□□□ 0.45
CLDN5O00501 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLDN5O00501 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN5O00501 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
CLDN5O00501 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms