Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM238C9JI98 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM238C9JI98 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM238C9JI98 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM238C9JI98 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM238C9JI98 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM238C9JI98 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM238C9JI98 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM238C9JI98 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 AC092068.3-201ENST00000587894 2016 ntBASIC12.01□□□□□ -0.49
TMEM238C9JI98 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 AC034236.2-201ENST00000606662 1610 ntBASIC12.01□□□□□ -0.49
TMEM238C9JI98 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 AC008687.6-201ENST00000596318 630 ntBASIC12.01□□□□□ -0.49
TMEM238C9JI98 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM238C9JI98 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.01□□□□□ -0.49
TMEM238C9JI98 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12□□□□□ -0.49
TMEM238C9JI98 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TMEM238C9JI98 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TMEM238C9JI98 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TMEM238C9JI98 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TMEM238C9JI98 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12□□□□□ -0.49
TMEM238C9JI98 Z82170.1-201ENST00000625081 3192 ntBASIC12□□□□□ -0.49
TMEM238C9JI98 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12□□□□□ -0.49
TMEM238C9JI98 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12□□□□□ -0.49
TMEM238C9JI98 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12□□□□□ -0.49
TMEM238C9JI98 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12□□□□□ -0.49
TMEM238C9JI98 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12□□□□□ -0.49
TMEM238C9JI98 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TMEM238C9JI98 SDHAP2-201ENST00000455183 2001 ntBASIC12□□□□□ -0.49
TMEM238C9JI98 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
TMEM238C9JI98 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12□□□□□ -0.49
TMEM238C9JI98 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12□□□□□ -0.49
TMEM238C9JI98 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
TMEM238C9JI98 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TMEM238C9JI98 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12□□□□□ -0.49
TMEM238C9JI98 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12□□□□□ -0.49
TMEM238C9JI98 DUTP2-201ENST00000519164 463 ntBASIC12□□□□□ -0.49
TMEM238C9JI98 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms