Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC006557.2-201ENST00000592985 1240 ntBASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 TUBB8P12-201ENST00000308911 1335 ntBASIC17■□□□□ 0.31
CCDC162PA2VCL2 TUBB7P-202ENST00000428444 1305 ntBASIC17■□□□□ 0.31
CCDC162PA2VCL2 TUBB8P7-204ENST00000567960 1332 ntBASIC17■□□□□ 0.31
CCDC162PA2VCL2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 KRT126P-201ENST00000549467 1181 ntBASIC17■□□□□ 0.31
CCDC162PA2VCL2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 AL031008.1-201ENST00000619963 541 ntBASIC17■□□□□ 0.31
CCDC162PA2VCL2 AC018695.7-201ENST00000624587 2492 ntBASIC17■□□□□ 0.31
CCDC162PA2VCL2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC162PA2VCL2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17■□□□□ 0.31
CCDC162PA2VCL2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17■□□□□ 0.31
CCDC162PA2VCL2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 AC004870.1-201ENST00000315132 882 ntBASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 KRT18P27-201ENST00000427733 1299 ntBASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 PAWRP1-201ENST00000451083 565 ntBASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 AC018712.1-201ENST00000455767 687 ntBASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 AC148477.8-201ENST00000624298 468 ntBASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms