Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 AC234783.1-201ENST00000441761 496 ntBASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 AC018470.1-201ENST00000624790 3129 ntBASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 AL023806.1-201ENST00000603994 1649 ntBASIC20.39■□□□□ 0.85
ZC3H4Q9UPT8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 RN7SL837P-201ENST00000463010 287 ntBASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 AC068587.10-201ENST00000641210 219 ntBASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZC3H4Q9UPT8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 RPL37AP1-201ENST00000412502 279 ntBASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 MIR4259-201ENST00000584466 101 ntBASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 AC133552.6-201ENST00000613406 534 ntBASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 REXO1L6P-201ENST00000603433 1515 ntBASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 AC020916.1-201ENST00000587762 1774 ntBASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ZC3H4Q9UPT8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.36■□□□□ 0.85
ZC3H4Q9UPT8 AL589739.1-201ENST00000607720 493 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms